The Open Organic Chemistry Journal

2014, 8 : 15-18
Published online 2014 October 28. DOI: 10.2174/1874095201408010015
Publisher ID: TOOCJ-8-15

A Highly Convenient Procedure for Oligodeoxynucleotide Purification

Durga Pokharel and Shiyue Fang
Department of Chemistry, Michigan Technological University, 1400 Townsend Drive, Houghton, MI 49931, USA.

ABSTRACT

Purification of synthetic oligodeoxynucleotides (ODNs) is simply achieved by capping failure sequences with a polymerizable phosphoramidite followed by polymerization. In this article, the reduction of the amount of polymerization monomer to drastically increase ODN extraction efficiency, the use of a centrifugal filterunit to ease the extraction process and the notification of using fresh phosphoramidite solutions are described. In addition, further evidence to support the purity of ODN and discussions of ODN stability under radical polymerization conditions are provided.

Keywords:

Catching by polymerization, DNA stability, high throughput, large scale, oligonucleotide, purification, radical.